DARPA's Big Mechanism programDARPA的大机制计划

DARPA's Big Mechanism programDARPA的大机制计划

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时间:2019-06-24

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1、PhysicalBiologyPAPER•OPENACCESSRelatedcontent-Modelingfor(physical)biologists:anDARPA'sBigMechanismprogramintroductiontotherule-basedapproachLilyAChylek,LeonardAHarris,JamesRFaederetal.Tocitethisarticle:PaulRCohen2015Phys.Biol.12045008-Fromphysicstopharmacology?RichardJAllenandTimothyCElston-State

2、--timespectrumofsignaltransductionlogicmodelsViewthearticleonlineforupdatesandenhancements.AidanMacNamara,CamilleTerfve,DavidHenriquesetal.Recentcitations-Emergingwhole-cellmodelingprinciplesandmethodsArthurPGoldbergetal-DynamicInfluenceNetworksforRule-BasedModelsAngusG.Forbesetal-LitPathExplorer:

3、aconfidence-basedvisualtextanalyticstoolforexploringliterature-enrichedpathwaymodelsAxelJSotoetalThiscontentwasdownloadedfromIPaddress60.186.211.6on06/08/2018at03:13Phys.Biol.12(2015)045008doi:10.1088/1478-3975/12/4/045008PAPERDARPAʼsBigMechanismprogramOPENACCESSPaulRCohenRECEIVEDDefenseAdvancedRe

4、searchProjectsAgency(DARPA)7November2014E-mail:paulrcohen@gmail.comREVISED21April2015Keywords:signalingpathways,machinereading,biocuration,informationextraction,artificialintelligence,modeling,systemsbiologyACCEPTEDFORPUBLICATION5May2015PUBLISHED15July2015AbstractReductionistscienceproducescausalmo

5、delsofsmallfragmentsofcomplicatedsystems.CausalContentfromthisworkmodelsofentiresystemscanbehardtoconstructbecausewhatisknownofthemisdistributedacrossmaybeusedunderthetermsoftheCreativeavastamountofliterature.TheBigMechanismprogramaimstohavemachinesreadtheliteratureCommonsAttribution3.0licence.and

6、assemblethecausalfragmentsfoundinindividualpapersintohugecausalmodels,automatically.AnyfurtherdistributionofThecurrentdomainoftheprogramiscellsignallingassociatedwithRas-drivencancers.thisworkmustmaintainattributiontotheauthor(s)andthetitleofthework,journalcitationWhenitcomestocomplicatedsystemssu

7、chasthe[2,8,41,52,54,55,63]);whileitdevelopsrepresenta-andDOI.climate,andeconomic,ecologicalandbiologicaltionsandinferencemethodsformechanisticbiologi-systems,ourinfluencerunsaheadofourunderstand-calmodels,methods

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