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1、Canoco软件操作的简单教程步骤:1.打开excel文档,如下图所示,包含环境变量(12个)和生物因子(15种C源利用性)。共是8个处理,每个处理三个重复,总共是24个土壤样品。Potential:potentiallymineralizableorganicCpools;SOC,solubleorganicCextractedby2MKCl;SON,solubleorganicNextractedby2MKCl;soilmoisturecontent;TC,TotalC;TN,TotalN;WHC,waterholdingcapacity;MBC,microb
2、ialbiomassC;MBN,MicrobialbiomassN.The15Csourceswerechosentocoverarangeoflowmolecularweightcompounds(includingcarbohydrates,aminoacidsandcarboxylicacids)thatarecommonlyinrootexudates(Campbelletal.,2008).Thenumbersfrom1to16correspondtorepresentL-alanine,L-arginine,citricacid,D-galactose
3、,aminobutyricacid,malicacid,oxalicacid,3,4-OHbenzoicacid,L-arabinose,L-cysteine,D-fructose,D-glucose,L-lysine,N-acetylglucosamine,D-trehalose,water,respectively.6 选中区域(包括前面的数字),点击复制,然后打开canoco软件中WcanoIMP,如下图所示。然后选中saveincondensedformat,然后点击save。分别保存文件为environ.dta(dta是canoco默认的样式)和spec
4、ies.dta.文件形式如下图。62.打开canoco软件—newproject,得到下面的界面。63.点下一步后,有三个brown窗口,前2个分别选择environ.dta和species.dta.第三个选择软件自带合适的处理方法(如CCA和RDA等)。本文是选用RDA分析。4.其他还有一些窗口,但是问题不大,这里就不多说了。直接进入下一步,点击analyze,如下图所示。完成后点击canodraw。65.点击create窗口,如下图所示。得到最后的结果。结果的解释:Therelationshipsbetweenenvironmentalfactorsandmi
5、crobialmetabolicprofileswereasshownabove.Plotscanbeinterpretedquantitativelyusingthelengthofthearrowtoindicatehowmuchvariancewasexplainedbythatfactor;thedirectionofthearrowsforindividualenvironmentalfactorindicatinganincreasingweightingofthatfactor.Thesoilsamplearrowspointinginapproxi
6、matelythesamedirectionastheenvironmentalarrowsindicateahighpositivecorrelation(thelongerthesoilsample6arrow,thestrongertherelationship;Kennedyetal.,2004).Amongallenvironmentalfactors,C0exhibitedthegreatestinfluenceonthesoilsamples(P<0.01)followedbypHandsoilmoistureandSONcontent.Whatis
7、drivingchanges?PreviousstudieshavesuggestedthatRDAwasasuitablemethodforquantifytherelationshipbetweenenvironmentalfactorsandchangesinmicrobialcommunityofsoils(Kennedyetal.,2004;Macdonaldetal.,2009).Inthisstudy,wefoundthatclassifiedmicrobialmetabolicprofilesbasedoncovercroptreatmentsan
8、dquan