the r book mixedeffects models

the r book mixedeffects models

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时间:2018-02-11

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1、19Mixed-EffectsModelsUptothispoint,wehavetreatedallcategoricalexplanatoryvariablesasiftheywerethesame.ThisiscertainlywhatR.A.Fisherhadinmindwhenheinventedtheanalysisofvarianceinthe1920sand1930s.ItwasEisenhart(1947)whorealizedthattherewereactuallytwofundamentallydifferentsortsofcategoricalexplan

2、atoryvariables:hecalledthesefixedeffectsandrandomeffects.Itwilltakeagooddealofpracticebeforeyouareconfidentindecidingwhetheraparticularcategoricalexplanatoryvariableshouldbetreatedasafixedeffectorarandomeffect,butinessence:fixedeffectsinfluenceonlythemeanofy;randomeffectsinfluenceonlythevarianceofy

3、.Fixedeffectsareunknownconstantstobeestimatedfromthedata.Randomeffectsgovernthevariance–covariancestructureoftheresponsevariable(seep.519).Nesting(orhierarchicalstructure)ofrandomeffectsisaclassicsourceofpseudoreplication,soitimportantthatyouareabletorecognizeitandhencenotfallintoitstrap.Random

4、effectsthatcomefromthesamegroupwillbecorrelated,andthiscontravenesoneofthefundamentalassumptionsofstandardstatisticalmodels:independenceoferrors.Randomeffectsoccurintwocontrastingkindsofcircumstances:observationalstudieswithhierarchicalstructure;designedexperimentswithdifferentspatialortempor

5、alscales.Fixedeffectshaveinformativefactorlevels,whilerandomeffectsoftenhaveuninformativefactorlevels.Thedistinctionisbestseenbyanexample.Inmostmammalspeciesthecategoricalvariablesexhastwolevels:maleandfemale.Foranyindividualthatyoufind,theknowledgethatitis,say,femaleconveysagreatdealofinformati

6、onabouttheindividual,andthisinformationdrawsonexperiencegleanedfrommanyotherindividualsthatwerefemale.Afemalewillhaveawholesetofattributes(associatedwithherbeingfemale)nomatterwhatpopulationthatindividualwasdrawnfrom.Takeadifferentcategoricalvariablelikegenotype.Ifwehavetwogenotypesinapopulatio

7、nwemightlabelthemAandB.IfwetaketwomoregenotypesfromadifferentpopulationwemightlabelthemAandBaswell.Inacaselikethis,thelabelAdoesnotconveyanyinformationatallaboutthegenotype,otherthanthatitisprobablydifferentfromgenotypeB.Inthecase

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