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1、BioNumerics生物信息分析统一平台上海一贝科技许先生15821483715Onepowerfulplatformfordatabasing,analyzing,andsharingallyourbiologicaldataBioNumericsBioNumerics7.1模块Datamodules数据模块FingerprintData.Normalizationandanalysisofelectrophoresisfingerprintsfromslabgels,automatedsequencers,andlab-on-achipsystems.Preprocessinganda
2、nalysisofspectraldatasuchasMALDI.CharacterData.Importandanalyzecharacterdatafromawiderangeofsourcesincludingphenotypepanels,antibioticresistanceprofiles,microarrays,etc.SequenceData.AssembleandanalyzeSangersequencedataandNGSsequencereads.Accessawidevarietyofsequenceanalysis,searchandalignment,andco
3、mparisontools.WholeGenomeMapData.Alignandclusterwholegenomemapsforbacterialstraintypingandidentification.TrendData.Analyzesequentialmeasurementsthatexpressanevolutionofoneparameterinfunctionofanother,e.g.,enzymaticactivity,growthcurves,rt-PCR,etc.AnalysismodulesTreeandNetworkInference.Selectfromani
4、mpressiverangeofclusteringalgorithmstocalculateevolutionarytreesandrelationshipnetworks.Displayconfidencelevelsonclustersandbranches.DimensioningandMatrixMining.Createnon-hierarchicalgroupingsusingvariousordinationtechniquessuchasprincipalcomponentsanalysis,multidimensionalscaling,discriminantanaly
5、sis,andidentifydiscriminatingfeaturesbetweengroups.Performin-depthanalysisofcharactermatrices.GenomeAnalysisTools.Alignandcomparechromosomesside-by-sideorcalculatemultiplechromosomealignments.CalculateSNPsandmutationsonmulti-chromosomealignmentsandannotatenewchromosomes.Performmicrobialmetagenomics
6、diversityanalysis.ClassifiersandIdentification.Identifyunknownsamplesagainstreferencedatasetsusingstate-of-the-artclassifierssuchasNaiveBayesian,SVM,ShrunkenCentroids,andarangeofsimilaritycoefficients.Enhanceyouridentificationprojectswithparameteroptimizationandcomprehensivecross-validationtools.Co
7、mpareandvalidatedifferenttechniquesorprocedures.VersioningandAuditTrails.Createauditeddatabases(fullyFDATitle21CFRPart11compliant)byrecordingallchangesandkeepingallversionsofselecteddatabaseobjects.Comparea