基于线粒体基因组变异的越南和中国猪种的遗传多样性分析

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1、HuazhongAgriculturalUniversityMasler’sDissertation2016ChapterIV-‘Results．．．．．．．：!：11Phenotypicdatacollection．．．．．．222MitochondrialDNAcharacteristicsofVietnamesepigbreeds．．233Phylogeneticanalysis．．．．．．．．．．．．．．．．．．．．．．，．．．．．．．．．．．．．．．．．．．．．334Networkanal

2、ysis．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．38ChapterV．Discussion．．．．．．．．．．．．．．．．．．．．．．。．．．．．．．．．41lPhenotypeofMongCaiandBanpigbreedsinVietnam．．．．．．．．．．．．．．．．．412MitochondrialDNAcharacteristicsofVietnamesepigbreeds一423Phylogeneticrelationship．．z}4Chapter—VIConcl

3、usionandRecommendation461Conclusion．462Recommendation．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．47References．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．48Publication．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．，．．．．．．．．．．．58Appendix．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．．

4、．．．．．．59Acknowledgements．．：．．64Ⅱ万方数据CharacterizationofgeneticdiversityofVietnameseandChinesepigbreedsbased011mitochon——dr—i—algen—o—mevar—i—at—io—n—ListoftablesTable1：PigproductionsystemsinVietnamin1999and20064Table2．Informationofprimersamplifyingwhole

5、mtDNAsequences．．．．18Table3．InformationofphenotypicdataofMongCaiandBanpigbreeds．．．．．．．．．．23Table4iMitochondrialDNAorganizationofMongCaipigbreed(MCAl4)．j．．．．．．．．．25Table5．MitochondrialDNAorganizationofBanpigbreed(BAl0)．．．．．．．．．．27Table6．MitochondrialDNAo

6、rganizationofwildboar(wB1)29Table7．Haplotypedistributionbetweendomesticpigsandwildboars．．．．．．．．．．．．39Table8．Pairwisegeneticdistancebetweengroups．．．．．．．．．．．．．40Table9．InformationofreferentialmtDNAsequencesusedinthisstudy一59ListoffiguresFigure1．Thepigpop

7、ulationfrom2004to2014inVietnam(1millionheads)3Figure2．VertebratemitochondrialDNA(mtDNA)．10Figure3．Samplingplace，SonLaprovince，Vietnam—redcolour16Figure4．PictureofthreeVietnamesepigbreeds．．．．．．22Figure5．BasecontentofmitochondrialgenomesofVietnamesepigbr

8、eeds．．．．．．．24Figure6．MtDNAstructuresofVietnamesepigs．3lFigure7．ThebasecompositionsofmitochondrialDNAsequencesofsixindividualsfromChinaandVietnam．．．．32Figure8．TheNeighbour-Joiningphylogenetictreeof154completemitochondrialDNAsequences．，．．