伯杰氏细菌系统分类学实用手册

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伯杰氏细菌系统分类学手册伯杰氏细菌系统分类学手册《伯杰氏细菌系统分类学手册》（“Bergry’sManualofSystematicBacteriology”），第二版，2001年春，Springer-Verlag公司，GergeM.Garrity,MattewWinters和NeniseB.Searles第二版五卷本与第一版相比又有较大改动，与第八、第九版伯杰氏细菌鉴定学手册也有明显区别。它不是根据表型，而是以系统发生（进化）的框架为基础。参照了16SrDNA的序列。编辑们预计在手册第一卷到最后一卷出版的5、6年间，可能会再发现100多个新属。他们会不断修订错误，在后继出版的各卷中，出一个新的分类大纲。伯杰氏手册公司的网站（）也会定期更新。第二版的第一卷在2001年5月出版；第二卷在2004年2月出版。古生菌域（Domain“Archaea”）1.第AI门泉古生菌门(Crenarchaeotaphy.nov.)第I纲热变形菌纲(Thermoproteiclass.nov.)第I目热变形菌目(Thermoproteales)第I科热变形菌科(Thermoproteaceae)第I属热变形菌属(Thermoproteus)第II属热杆菌属(Caldivirga)第III属热棒菌属(Pyrobaculum)第IV属热枝菌属(Thermocladium)第II科热丝菌科(Thermofilaceae)第I属热丝菌属(Thermofilum)第II目硫还原古球菌目(Desulfurococcalesord.nov.)第I科硫还原古球菌科(Desulfurococcaceae)第I属硫还原古球菌属(Desulfurococcus)第II属(Acidolobus)第III属气热菌属(Aeropyrum)第IV属浆果状火球菌属(Ignicoccus)第V属葡萄嗜热菌属(Staphylothermus)第VI属斯梯特氏菌属(Stetteria)第VII属恐硫球菌属(Sulfophobococcus)第VIII属热盘菌属(Thermodiscusgen.nov.)第IX属耐热球菌属(Thermosphaera)第II科热网菌科(Pyrodictiaceae)第I属热网菌属(Pyrodictium)第II属栖高温菌属(Hyperthermus)第III属热叶菌属(Pyrolobus)第III目硫化叶菌目(Sulfolobales)第I科硫化叶菌科(Sulfolobaceae)第I属硫化叶菌属(Sulfolobus)第II属酸菌属(Acidianus)第III属生金球菌属(Metallosphaera)

1第IV属栖冥河菌属(Stygiolobus)第V属硫代谢球菌属(Sulfurisphaera)第VI属硫化球菌属(Sulfurococcus)1.第AII门广古生菌门(Euryarchaeotaphy.nov.)第I纲甲烷杆菌纲(Methanobacteriaclass.nov.)第I目甲烷杆菌目(Methanobacteriales)第I科甲烷杆菌科(Methanobacteriaceae)第I属甲烷杆菌属(Methanobacterium)第II属甲烷短杆菌属(Methanobrevibacter)第III属甲烷球形菌属(Methanosphaera)第IV属甲烷嗜热杆菌属(Methanothermobacter)第II科甲烷嗜热菌科(Methanothermaceae)第I属甲烷嗜热菌属(Methanothermus)第II纲甲烷球菌纲(Methanococciclass.nov.)第I目甲烷球菌目(Methanococcales)第I科甲烷球菌科(Methanococcaceae)第I属甲烷球菌属(Methanococcus)第II属甲烷嗜热球菌属(Methanothermococcusgen.nov.)第II科甲烷热球菌科(Methanocaldococcaceaefam.nov.)第I属甲烷热球菌属(Methanocaldococcusgen.nov.)第II属甲烷干热菌属(Methanotorrisgen.nov.)第II目甲烷微菌目(Methanomicrobiales)第I科甲烷微菌科(Methanomicrobiaceae)第I属甲烷微菌属(Methanomicrobium)第II属甲烷袋状菌属(Methanoculleus)第III属产甲烷袋菌属(Methanofollis)第IV属产甲烷菌属(Methanogenium)第V属叶形甲烷菌属(Methanolacinia)第VI属甲烷盘菌属(Methanoplanus)第II科甲烷粒菌科(Methanocorpusculaceae)第I属甲烷粒菌属(Methanocorpusculum)第III科甲烷螺菌科(Methanospirillaceaefam.nov.)第I属甲烷螺菌属(Methanospirillum)未定属第I属产甲烷石状菌属(Methanocalculus)第III目甲烷八叠球菌目(Methanosarcinales)第I科甲烷八叠球菌科(Methanosarcinaceae)第I属甲烷八叠球菌属(Methanosarcina)第II属甲烷拟球菌属(Methanococcoides)第III属甲烷喜盐菌属(Methanohalobium)第IV属甲烷嗜盐菌属(Methanohalophilus)第V属甲烷叶菌属(Methanolobus)

2第VI属甲烷微球菌属(Methanomicrococcus)第VII属甲烷盐菌属(Methanosalsumgen.nov.)第II科鬃毛甲烷菌科(Methanosaetaceaefam.nov.)第I属鬃毛甲烷菌科属(Methanosaeta)第III纲盐杆菌纲(Halobacteriaclass.nov.)第I目盐杆菌目(Halobacteriales)第I科盐杆菌科(Halobacteriaceae)第I属盐杆菌属(Halobacterium)第II属盐盒菌属(Haloarcula)第III属盐棒杆菌属(Halobaculum)第IV属盐球菌属(Halococcus)第V属富盐菌属(Haloferax)第VI属盐几何形菌属(Halogeometricum)第VII属盐杆状菌属(Halorhabdus)第VIII属盐红菌属(Halorubrum)第IX属盐栖菌属(Haloterrigena)第X属无色嗜盐菌属(Natrialba)第XI属钠线菌属(Natrinema)第XII属嗜盐碱杆菌属（Natronobacterium）第XIII属嗜盐碱球菌属(Natronococcus)第XIV属嗜盐碱单胞菌属(Natronomonas)第XV属碱红菌属(Natronorubrum)第IV纲热原体纲(Thermoplasmataclass.nov.)第I目热原体目(Thermoplasmatalesord.nov.)第I科热原体科(Thermoplasmataceaefam.nov.)第I属热原体属(Thermoplasma)第II科嗜酸古菌科(Picrophilaceae)第I属嗜酸古菌属(Picrophilus)第III科铁原体科(Ferroplasmataceae)第I属铁原体属(Ferroplasma)第V纲热球菌纲(Thermococciclass.nov.)第I目热球菌目(Thermococcales)第I科热球菌科(Thermococcaceae)第I属嗜热球菌属(Thermococcus)第II属古老球菌属(Palaeococcus)第III属热球菌属(Pyrococcus)第VI纲古生球菌纲(Archaeoglobiclass.nov.)第I目古生球菌目(Archaeoglobalesord.nov.)第I科古生球菌科(Archaeoglobaceaefam.nov.)第I属古生球菌属(Archaeoglobus)第II属铁球菌属(Ferroglobus)

3第VII纲甲烷嗜高热菌纲(Methanopyriclass.nov.)第I目甲烷嗜高热菌目(Methanopyralesord.nov.)第I科甲烷嗜高热菌科(Methanopyraceaefam.nov.)第I属甲烷嗜高热菌属(Methanopyrus)1.细菌域“Bacteria”第BI门产液菌门(Aquificaephy.nov.)第I纲产液菌纲(Aquificaeclass.nov.)第I目产液菌目(Aquificalesord.nov.)第I科产液菌科(Aquificaceaefam.nov.)第I属产液菌属(Aquifex)第II属热杆菌属(Calderobacterium)第III属氢杆菌属(Hydrogenobacter)第IV属热发状菌属(Thermocrinis)未定属第I属脱硫杆状菌属(Desulfurobacterium)2.第BII门栖热袍菌门(Thermotogaephy.nov.)第I纲栖热袍菌纲(Thermotogaeclass.nov.)第I目栖热袍菌目(Thermotogalesord.nov.)第I科栖热袍菌科(Thermotogaceaefam.nov.)第I属栖热袍菌属(Thermotoga)第II属闪烁杆菌属(Fervidobacterium)第III属地袍菌属(Geotoga)第IV属石袍菌属(Petrotoga)第V属栖热腔菌属(Thermosipho)3.第BIII门热脱硫杆菌门(Thermodesulfobacteriaphy.nov.)第I纲热脱硫杆菌纲(Thermodesulfobacteriaclass.nov.)第I目热脱硫杆菌目(Thermodesulfobacterialesord.nov.)第I科热脱硫杆菌科(Thermodesulfobacteriaceaefam.nov.)第I属热脱硫杆菌属(Thermodesulfobacterium)4.第BIV门异常球菌——栖热菌门(Deinococcus-Thermus)第I纲异常球菌纲(Deinococciclass.nov.)第I目异常球菌目(Deinococcales)第I科异常球菌科(Deinococcaceae)第I属异常球菌属(Deinococcus)第II目栖热菌目(Thermalesord.nov.)第I科栖热菌科(Thermaceaefam.nov.)

4第I属栖热菌属(Thermus)第II属稍热菌属(Meiothermus)1.第BV门金矿菌门(Chrysiogenetesphy.nov.)第I纲金矿菌纲(Chrysiogenetesclass.nov.)第I目金矿菌目(Chrysiogenalesord.nov.)第I科金矿菌科(Chrysiogenaceaefam.nov.)第I属金矿菌属(Chrysiogenes)2.第BVI门绿屈挠菌门(Chloroflexiphy.nov.)第I纲绿屈挠菌纲(Chloroflexi)第I目绿屈挠菌目(Chloroflexales)第I科绿屈挠菌科(Chloroflexaceae)第I属绿屈挠菌属（Chloroflexus）第II属绿丝菌属(Chloronema)第III属螺丝菌属(Heliothrix)第II科颤绿细菌科(Oscillochloridaceae)第I属绿颤细菌属(Oscillochloris)第II目滑柱菌目(Herpetosiphonales)第I科滑柱菌科(Herpetosiphonaceae)第I属滑柱菌属(Herpetosiphon)第BVII门热微菌门(Thermomicrobiaphy.nov.)第I纲热微菌纲(Thermomicrobiaclass.nov.)第I目热微菌目(Thermomicrobialesord.nov.)第I科热微菌科(Thermomicrobiaceaefam.nov.)第I属热微菌属(Thermomicrobium)第BVIII门硝化螺菌门(Nitrospiraphy.nov.)第I纲硝化螺菌纲(Nitrospira)第I目硝化螺菌目(Nitrospirales)第I科硝化螺菌科(Nitrospiraceae)第I属硝化螺菌属(Nitrospira)第II属钩端螺菌属(Leptospirillum)第III属磁细菌属(Magnetobacterium)第IV属热脱硫弧菌属(Thermodesulfovibrio)第BIX门铁还原杆菌门(Deferribacteresphy.nov.)

5第I纲铁还原杆菌纲(Deferribacteresclass.nov.)第I目铁还原杆菌目(Deferribacteralesord.nov.)第I科铁还原杆菌科(Deferribacteraceaefam.nov.)第I属铁还原杆菌属(Deferribacter)第II属氮还原弧菌属(Denitrovibrio)第III属弯枝菌属(“Flexistipes”)第IV属地弧菌属(Geovibrio)未定属第I属互养菌属(Synergistes)第BX门蓝细菌门(Cyanobacteria)第I纲蓝细菌(Cyanobacteria)第I亚组第I科第I形态属管孢蓝细菌属(Chamaesiphon)第II形态属色球蓝细菌属(Chroococcus)第III形态属蓝细菌属(Cyanobacterium)第IV形态属蓝菌属(Cyanobium)第V形态属蓝丝菌属(Cyanothece)第VI属蓝菌属(Dactylococcopsis)第VII形态属粘杆菌属(Gloeobacter)第VIII形态属粘球蓝细菌属(Gloeocapsa)第IX形态属粘杆蓝细菌属(Gloeothece)第X形态属微囊蓝胞菌属(Microcystis)第XI形态属原绿球菌属(Prochlorococcus)第XII形态属原绿蓝细菌属(Prochloron)第XIII形态属聚球蓝细菌属(Synechococcus)第XIV形态属集胞蓝细菌属(Synechocystis)第II亚组第I科第I形态属蓝囊胞菌属(Cyanocystis)第II形态属小皮果蓝细菌属(Dermocarpella)第III形态属斯塔尼尔氏菌属(Stanieria)第IV形态属异球蓝细菌属(Xenococcus)第II科第I形态属拟色球蓝细菌属(Chroococcidiopsis)第II形态属粘八叠球菌属(Myxosarcina)第III形态属宽球蓝细菌属(Pleurocapsa)第III亚组第一科第I形态属节螺蓝细菌属(Arthrospira)第II形态属博氏蓝细菌属(Borzia)第III形态属发毛针蓝细菌属(Crinalium)第IV形态属吉特勒氏线状蓝细菌属(Geitlerinema)

6第V属盐螺旋藻属(Halospirulina)第VI形态属纤发鞘丝蓝细菌属(Leptolyngbya)第VII形态属湖丝蓝细菌属(Limnothrix)第VIII形态属鞘丝蓝细菌属(Lyngbya)第IX形态属微鞘蓝细菌属(Microcoleus)第X形态属颤蓝细菌属(Oscillatoria)第XI形态属浮霉丝状蓝细菌属(Planktothrix)第XII形态属原绿丝蓝细菌属(Prochlorothrix)第XIII形态属假鱼腥蓝细菌属(Pseudanabaena)第XIV形态属螺旋蓝细菌属(Spirulina)第XV形态属斯塔尔氏蓝细菌属(Starria)第XVI形态属束蓝细菌属(Symploca)第XVII形态属束毛蓝细菌属(Trichodesmium)第XVIII形态属灰线蓝细菌属(Tychonema)第IV亚组第I科第I形态属鱼腥蓝细菌属(Anabaena)第II形态属项圈蓝细菌属(Anabaenopsis)第III形态属蓝束丝蓝细菌属(Aphanizomenon)第IV形态属蓝螺菌属(Cyanospira)第V形态属拟筒孢蓝细菌属(Cylindrospermopsis)第VI形态属筒孢蓝细菌属(Cylindrospermum)第VII形态属节球蓝细菌属(Nodularia)第VIII形态属念珠蓝细菌属(Nostoc)第IX形态属伪枝蓝细菌属(Scytonema)第II科第I形态属眉蓝细菌属(Calothrix)第II形态属胶须蓝细菌属(Rivularia)第III形态属单歧蓝细菌属(Tolypothrix)第V亚组第I科第I形态属拟绿胶蓝细菌属(Chlorogloeopsis)第II形态属飞氏蓝细菌属(Fischerella)第III形态属吉特勒氏蓝细菌属(Geitleria)第IV形态属(Iyengariella)第V形态属拟念珠蓝细菌属(Nostochopsis)第VI形态属真枝蓝细菌属(Stigonema)第BXI门绿菌门(Chlorobiphy.nov.)第I纲“绿菌纲”(“Chlorobia”)第I目绿菌目(Chlorobiales)第I科绿菌科(Chlorobiaceae)第I属绿菌属(Chlorobium)

7第II属绿臂菌属(Ancalochloris)第III属绿滑菌属(Chloroherpeton)第IV属暗网菌属(Pelodictyon)第V属突柄绿菌属(Prosthecochloris)第BXII门变形杆菌门(Proteobacteriaphy.nov.)第I纲“阿耳法变形杆菌纲”(“Alphaproteobacteria”)第I目红螺菌目(Rhodospirillales)第I科红螺菌科(Rhodospirillaceae)第I属红螺菌属(Rhodospirillum)第II属固氮螺菌属(Azospirillum)第III属磁螺菌属(Magnetospirillum)第IV属棕色螺菌属(Phaeospirillum)第V属红篓菌属(Rhodocista)第VII属红螺旋菌属(Rhodospira)第VII属海玫瑰菌属(Rhodothalassium)第VIII属玫瑰弧菌属(Rhodovibrio)第IX属蔷薇螺菌属(Roseospira)第X属斯科曼氏球菌属(Skermanella)第II科醋杆菌科(Acetobacteraceae)第I属醋杆菌属(Acetobacter)第II属嗜酸菌属(Acidiphilium)第III属酸球形菌属(Acidisphaera)第IV属酸胞菌属(Acidocella)第V属酸单胞菌属(Acidomonas)第VI属(Asaia)第VII属脆弱球菌属(Craurococcus)第VIII属葡糖酸醋杆菌属(Gluconacetobacter)第IX属葡糖杆菌属(Gluconobacter)第X属副脆弱球菌属(Paracraurococcus)第XI属红球形菌属(Rhodopila)第XII属玫瑰球菌属(Roseococcus)第XIII属星状菌属(Stella)第XIV属扎瓦尔金氏菌属(Zavarzinia)第II目立克次氏体目(Rickettsiales)第I科立克次氏体科(Rickettsiaceae)第I属立克次氏体属(Rickettsia)第II属东方体属(Orientia)第III属沃尔巴克氏体属(Wolbachia)第II科埃里希氏体科(Ehrlichiaceae)第I属埃里希氏体属(Ehrlichia)第II属埃及小体属(Aegyptianella)第III属无形小体属(Anaplasma)

8第IV属考德里氏体属(Cowdria)第V属新立克次氏体属(Neorickettsia)第VI属(Xenohaliotis)第III科“全孢螺菌科”(“Holosporaceae”)第I属全孢螺菌属(Holospora)第II属杀手杆菌屑(Caedibacter)第III属溶菌属(Lyticum)第IV属多核杆菌属(Polynucleobacter)第V属类杀手杆菌属(Pseudocaedibacter)第VI属共生小体属(Symbiotes)第VII属罩杆菌属(Tectibacter)第VIII属(Odyssella)第III目红杆菌目(Rhodobacterales)第I科红杆菌科(Rhodobacteraceae)第I属红杆菌属(Rhodobacter)第II属阿赫兰氏菌属(Ahrensia)第III属下水道球菌属(Amaricoccus)第IV属南极杆菌属(Antarctobacter)第V属芽殖杆菌属(Gemmobacter)第VI属海氏菌属(Hirschia)第VII属生丝单胞菌属(Hyphomonas)第VIII属海洋杆状菌属(Maricaulis)第IX属甲基盒菌属(Methylarcula)第X属十八杆菌属(Octadecabacter)第XI属副球菌属(Paracoccus)第XII属小红卵菌属(Rhodovulum)第XIII属玫瑰菌属(Roseibium)第XIV属(Roseinatronobacter)第XV属粉红活动菌属(Roseivivax)第XVI属玫瑰杆菌属(Roseobacter)第XVII属玫瑰变色菌属(Roseovarius)第XVIII属红色单胞菌属(Rubrimonas)第XIX属鲁杰氏菌属(Ruegeria)第XX属箭头菌属(Sagittula)第XXI属斯塔雷氏菌属(Staleya)第XXII属斯塔普氏菌属(Stappia)第XXIII属亚硫酸盐杆菌属（Sulfitobacter）第IV目鞘氨醇单胞菌目(“Sphingomonadales”)第I科鞘氨醇单胞菌科(“Sphingomonadaceae”)第I属鞘氨醇单胞菌属（Sphingomonas）第II属芽单泡菌属(Blastomonas)第III属赤细菌属(Erythrobacter)第IV属赤微菌属(Erythromicrobium)第V属红单胞菌属(Erythromonas)

9第VI属产卟啉杆菌属(Porphyrobacter)第VII嘱根单胞菌属(Rhizomonas)第VIII属橙色杆菌属（Sandaracinobacter）第IX属发酵单咆菌属(Zymomonas)第V目柄杆菌目(Caulobacterales)第I科柄杆菌科(Caulobacteraceae)第I属柄杆菌属(Caulobacter)第II属不粘柄菌属(Asticcacaulis)第III属短波单胞菌属(Brevundimonas)第IV属苯基杆菌属(Phenylobacterium)第VI目“根瘤菌目”(“Rhizobiales”)第I科根瘤菌科(Rhizobiaceae)第I属根瘤菌属(Rhizobium)第II属土壤杆菌属(Agrobacterium)第III属嗜碳菌属(Carbophilus)第IV属螯合杆菌属(Chelatobacter)第V属剑菌属(Ensifer)第VI属中华根瘤菌属(Sinorhizobium)第II科巴尔通氏体科(Bartonellaceae)第I属巴尔通氏体属(Bartonella)第III科市鲁氏菌科(Brucellaceae)第I属布鲁氏菌属(Brucella)第II属枝面菌属(Mycoplana)第III属苍白杆菌属(Ochrobactrum)第IV科“叶瘤杆菌科”(“Phyllobacteriaceae”)第I属叶瘤杆菌属(Phyllobacterium)第II属异根瘤菌属(Allorhizobium)第III属氨基杆菌属(Aminobacter)第IV属污水菌属(Aquamicrobium)第V属废水杆菌属(Defluvibacter)第VI属中间根瘤菌属(Mesorhizobium)第VII属假氨基酸杆菌属(Pseudaminobacter)第V科“甲基孢囊菌科”(“Methylocystaceae”)第I属甲基孢囊菌属(Methylocystis)第II属甲基球形菌属(Methylopila)第III属甲基弯曲菌属(Methylosinus)第VI科“拜叶林克氏菌科”(“Beijerinckiaceae”)第I属拜叶林克氏菌属(Beijerinckia)第II属螯台球菌属(Chelatococcus)第III属德克斯氏菌属(Derxia)第IV属（Methylocella）第VII科“慢生根瘤菌科”(“Bradyrhizobiaceae”)第I属慢生根瘤菌属(Bradyrhizobium)第II属阿菲波菌属(Afipia)

10第III属土壤单胞菌属(Agromonas)第IV属芽生杆菌属(Blastobacter)第V属包西氏菌属(Bosea)第VI属硝化杆菌属(Nitrobacter)第VII属寡养菌属(Oligotropha)第VIII属红假单胞菌属(Rhodopseudomonas)第VIII科生丝微菌科(Hyphomicrobiaceae)第I属生丝微菌属(Hyphomicrobium)第II属臂微菌属(Ancalomicrobium)第III属屈曲杆菌属(Ancylobacter)第IV属角微菌属(Angulomicrobium)第V属水杆菌属(Aquabacter)第VI属固氮根瘤菌属(Azorhizobium)第VII属绿芽菌属(Blastochloris)第VIII属戴沃斯菌属(Devosia)第IX属双歧微菌属(Dichotomicrobium)第X属线状微球菌属(Filomicrobium)第XI属芽殖菌属(Gemmiger)第XII属双头菌属(Labrys)第XIII属耗甲基杆菌属(Methylorhabdus)第XIV属土微菌属(Pedomicrobium)第XV属突柄微菌属(Prosthecomicrobium)碧XVI属红微菌属(Rhodomicrobium)第XVII属红游动菌属(Rhodoplanes)第XVIII属塞里伯氏菌属(Seliberia)第XIX属(Starkeya)第XX属黄色杆菌属(Xanthobacter)第IX科“甲基杆菌科”(“Methylobacteriaceae”)第I属甲基杆菌属(Methylobacterium)第II属甲基杆菌属(Protomonas)第III属玫瑰单胞菌属(Roseomonas)第X科“红菌科”(“Rhodobiaceae”)第I属红菌属(Rhodobium)第II纲“贝塔变形杆菌纲”(“Betaproteobacteria”)第I目“伯克霍尔德氏菌目”(“Burkholderiales”)第I科“伯克霍尔德氏菌科”(“Burkholderiaceae”)第I属伯克霍尔德氏菌属(Burkholderia)第II属贪铜菌属(Cupriavidus)第III属劳特罗普氏菌属(Lautropia)第IV属(Pandoraea)第V属热丝菌属(Thermothrix)第II科“罗尔斯通氏菌科”(“Ralstoniaceae”)第I属罗尔斯通氏菌属(Ralstonia)

11第III科“草酸杆菌科”(“Oxalobacteraceae”)第I属草酸杆菌属(Oxalobacter)第II属杜擀氏菌属(Duganella)第III属草螺菌属(Herbaspirillum)第IV属紫色杆菌属(Janthinobacterium)第V属(Massilia)第VI属地神菌属(Telluria)第IV科产碱杆菌科(Alcaligenaceae)第I属产碱杆菌属(Alcaligenes)第II属无色杆菌属(Achromobacter)第III属鲍特氏菌属(Bordetella)第IV属居鸽菌属(Pelistega)第V属萨特氏菌属(Sutterella)第VI属泰勒氏菌属(Taylorella)第V科丛毛单胞菌科(Comamonadaceae)第I属丛毛单胞菌属(Comamonas)第II属食酸菌属(Acidovorax)第III属水杆菌属(Aquabacterium)第IV属短单胞菌属(Brachymonas)第V属戴尔福特菌属(Delftia)第VI属氢噬胞菌属(Hydrogenophaga)第VII属艾德昂菌属(Ideonella)第VIII属纤发菌属(Leptothrix)第IX属极胞菌属(Polaromonas)第X属红育菌属(Rhodoferax)第XI属玫瑰色半光合菌属(Roseateles)第XII属红长命菌属(Rubrivivax)第XIII属球衣菌属(Sphaerotilus)第XIV属(Tepidimonas)第XV属硫单胞菌属(Thiomonas)第XVI属贪噬菌属(Variovorax)第II目“嗜氢菌目”(“Hydrogenophilales”)第I科“嗜氢菌科”(“Hydrogenophilaceae”)第I属嗜氢菌属(Hydrogenophilus)第II属硫杆菌属(Thiobacillus)第III目“嗜甲基菌目”(“Methylophilales”)第I科“嗜甲基菌科”(“Methylophilaceae”)第I属嗜甲基菌属(Methylophilus)第II属甲基小杆菌属(Methylobacillus)第III属食甲基菌属(Methylovorus)第IV目奈瑟氏球菌目(“Neisseriales”)第I科奈瑟氏球菌科(Neisseriaceae)第I属奈瑟氏球菌属(Neisseria)第II属小链菌属(Alysiella)

12第III属水螺菌属(Aquaspirillum)第IV属链状球菌属(Catenococcus)第V属色杆菌属(Chromobacterium)第VI属艾肯氏菌属(Eikenella)第VII属甲酸弧菌属(Formivibrio)第VIII属紫色小杆菌属(Iodobacter)第IX属金氏菌属(Kingella)第X属微枝杆菌属(Microvirgula)第XI属嗜脯氨酸菌属(Prolinoborus)第XII属西蒙斯氏菌属(Simonsiella)第XIlI属透明颤菌属(Vitreoscilla)第XIV属福格斯氏菌属(Vogesella)第V目“亚硝化单胞菌目”(“Nitrosomonadales”)第I科“亚硝化单胞菌科”(“Nitrosomonadaceae”)第I属亚硝化单胞菌属(Nitrosomonas)第II属亚硝化螺菌属(Nitrosospira)第II科螺菌科(Spirillaceae)第I属螺菌属(Spirillum)第III科嘉利翁氏菌科(Gallionellaceae)第I属嘉利翁氏菌属(Gallionella)第VI目“红环菌目”(“Rhodocyclales”)第I科红环菌科(Rhodocyclaceae)第I属红环菌属(Rhodocyclus)第II属固氮弧菌属(Azoarcus)第III属(Azonexus)第IV属固氮螺菌属(Azospira)第V属固氮弧菌属(Azovibrio)第VI属铁杆菌属(Ferribacterium)第VII属丙酸杆状菌属(Propionibacter)第VIII属丙酸弧菌属(Propionivibrio)第IX属索氏菌属(Thauera)第X属动胶菌属(Zoogloea)第III纲“伽马变形菌纲”(“Gammaproteobacteria”)第I目“着色菌目“(“Chromatiales”)第I科着色菌科(Chromatiaceae)第I属着色菌属(Chromatium)第II属异着色菌属（Allochromatium）第III属可变杆菌属(Amoebobacter)第IV属盐着色菌属(Halochromatium)第V属盐硫杆菌属(Halothiobacillus)第VI属等着色菌属(Isochromatium)第VII属闪杆菌属(Lamprobacter)第VIII属闪囊菌属(Lamprocystis)

13第IX属海洋着色菌属(Marichromatium)第X属亚硝化球菌属(Nitrosococcus)第XI属斐佛氏菌属(Pfennigia)第XII属杆状色菌属(Rhabdochromatium)第XIII属热着色菌属(Thermochromatium)第XIV属硫碱球菌属(Thioalkalicoccus)第XV属荚硫菌属(Thiocapsa)第XVI属硫球菌属(Thiococcus)第XVII属囊硫菌属(Thiocystis)第XVIII属网硫菌属(Thiodictyon)第XIX属第XX属盐荚硫菌属(Thiohalocapsa)第XXI属硫明卵菌属(Thiolamprovum)第XXII属板硫菌属(Thiopedia)第XXIII属热红球菌属(Thiorhodococcus)第XXIV属硫红弧菌属(Thiorhodovibrio)第XXV属硫螺旋菌届(Thiospirillum)第II科外硫红螺菌科（Ectothiorhodospiraceae）第I属外硫红螺菌属(Ectothiorhodospira)第II属非红单胞菌属(Arhodomonas)第III属需盐红螺菌属(Halorhodospira)第IV属硝化球菌属(Nitrococcus)第V属硫红螺菌属(Thiorhodospira)第II目酸硫杆菌目(Acidithiobacillales)第I科酸硫杆状菌科(Acidithiobacillaceae)第I属酸硫杆状菌属(Acidithiobacillus)第II科热硫杆状菌科(Thermithiobacillaceae)第I属热硫杆状菌属(Thermithiobacillus)第III目“黄单胞菌目”(“Xanthomonadales”)第I科“黄单胞菌科”(“Xanthomonadaceae”)第I属黄单胞菌属(Xanthomonas)第II属弗拉特氏菌属(Frateuria)第III属藤黄单孢菌属(Luteimonas)第IV属溶杆菌属(Lysobacter)第V属涅瓦河菌属(Nevskia)第VI属假黄单胞菌属(Pseudoxanthomonas)第VII属罗思河小杆菌属(Rhodanobacter)第VIII属寡养单胞菌属(Stenotrophomonas)第IX属木杆菌属(Xylella)第IV目“心杆菌目”(“Cardiobacteriales”)第I科心杆菌科(Cardiobacteriaceae)第I属心杆菌属(Cardiobacterium)第II属腐蹄杆菌属(Dichelobacter)第III属萨顿氏菌属(Suttonella)

14第V目“硫发菌目”(“Thiotrichales”)第I科“硫发菌科”(“Thiotrichaceae”)第I属硫发菌属(Thiothrix)第II属无色菌属(Achromatium)第III属贝日阿托氏菌属(Beggiatoa)第IV属亮发菌属(Leucothrix)第V属大单胞菌属(Macromonas)第VI属硫小杆菌属(Thiobacterium)第VII属硫珍珠状菌属(Thiomargarita)第VIII属辫硫菌属(Thioploca)第IX属硫螺菌属(Thiospira)第II科“鱼立克次氏体科”(“Piscirickettsiaceae”)第I属鱼立克次氏体属(Piscirickettsia)第II属解环菌属(Cycloclasticus)第III属氢弧菌属(Hydrogenovibrio)第IV属噬甲基菌属(Methylophaga)第V属硫微螺菌属(Thiomicrospira)第III科“弗朗西斯氏菌科”(“Francisellaceae”)第I属弗朗西斯氏菌属(Francisella)第VI目“军团菌目”(“Legionellales”)第I科军团菌科(Legionellaceae)第I属军团菌属(Legionella)第II科“考克斯氏体科”(“Coxiellaceae”)第I属考克斯氏体属(Coxiella)第II属立克次氏小体属(Rickettsiella)第VII目甲基球菌目(Methylococcales)第I科甲基球菌科(Methylococcaceae)第I属甲基球菌属(Methylococcus)第II属甲基杆菌属(Methylobacter)第III属喜热噬甲基菌属(Methylocaldum)第IV属甲基微菌属(Methylomicrobium)第V属甲基单胞菌属(Methylomonas)第VI属甲基球状菌属(Methylosphaera)第VIII目“海洋螺菌目”(“Oceanospirillales”)第I科“海洋螺菌科”(“Oceanospirillaceae”)第I属海洋螺菌属(Oceanospirillum)第II属浴者菌属(Balneatrix)第III属海床杆菌属(Fundibacter)第IV属海单胞菌属(Marinomonos)第V属海螺菌属(Marinospirillum)第VI属海神单胞菌属(Neptunomonas)第II科盐单胞菌科(Halomonadaceae)第I属盐单胞菌属(Halomonas)第II属食烷菌属(Alcanivorax)

15第III属肉胞菌属(Carnimonas)第IV属色盐杆菌属(Chromohalobacter)第V属德莱氏菌属(Deleya)第VI属发酵细菌属(Zymobacter)第IX目假单胞菌目(Pseudomonadales)第I科假单胞菌科(Pseudomonadaceae)第I属假单胞菌属(Pseudomonas)第II属氮单胞菌属(Azomonas)第III属固氮菌属(Azotobacter)第IV属纤维弧菌属(Cellvibrio)第V属金色单胞菌属(Chryseomonas)第VI属黄色单胞菌属(Flaviomonas)第VII属俊片菌属(Lampropedia)第VIII属中嗜杆菌属(Mesophilobacter)第IX属桑葚状球菌属(Morococcus)第X属寡源杆菌属(Oligella)第XI属根杆菌属(Rhizobacter)第XII属皱纹单胞菌属(Rugamonas)第XIII属蛇形菌属(Serpens)第XIV属栖热嗜油菌属(Thermoleophilum)第XV属嗜木杆菌属(Xylophilus)第II科莫拉氏菌科(Moraxellaceae)第I属莫拉氏菌属(Moraxella)第II属不动杆菌属(Acinetobacter)第III属嗜冷杆菌属(Psychrobacter)第X目“交替单胞菌目”(“Alteromonadales”)第I科“交替单胞菌科”(“Alteromonadaceae”)第I属交替单胞菌属(Alteromonas)第II属(Allishewanella)第III属科尔维尔氏菌属(Colwellia)第IV属铁还原单胞菌属(Ferrimomas)第V属冰居菌属(Glaciecola)第VI属(Idiomarina)第VII属海杆状菌属(Marinobacter)第VIII属海杆菌属(Marinobacterium)第IX属微泡菌属(Microbulbifer)第X属莫里特拉氏菌属(Moritella)第XI属假交替单胞菌属(Pseudoalteromonas)第XII属希瓦氏菌属(Shewanella)第XI目“弧菌目”(“Vibrionales”)第I科弧菌科(Vibrionaceae)第I属弧菌属(Vibrio)第II属异单胞菌属(Allomonas)第III属水栖菌属(Enhydrobacter)

16第IV属利斯顿氏菌属(Listonella)第V属发光杆菌属(Photobacterium)第VI属盐弧菌属(Salinivibrio)第XII目“气单胞菌目”(“Aeromonadales”)第I科气单胞菌科(Aeromonadaceae)第I属气单胞菌属(Aeromonas)第II属海洋单胞菌属(Oceanomonas)第III属甲苯单胞菌属(Tolumonas)第II科琥珀酸弧菌科(Succinivibrionaceae)第I属琥珀酸弧菌属(Succinivibrio)第II属厌氧螺菌属(Anaerobiospirillum)第III属瘤胃杆菌属(Ruminobacter)第IV属琥珀酸单胞菌属(Succinimonas)第XIII目肠杆菌目(Enterobacteriales)第I科肠杆菌科(Enterobacteriaceae)第I属肠杆菌属(Enterobacter)第II属交替球菌属(Alterococcus)第III属杀雄菌属(Arsenophonus)第IV属布伦勒氏菌属(Brenneria)第V属巴克纳氏菌属(Buchnera)第VI属布戴约维采菌属(Budvicia)第VII属布丘氏菌属(Buttiauxella)第VIII属鞘杆菌属(Calymmatobacterium)第IX属西地西菌属(Cedecea)第X属柠檬酸杆菌属(Citrobacter)第XI属爱德华氏菌属(Edwardsiella)第XII属欧文氏菌属(Erwinia)第XIII属埃希氏菌属(Escherichia)第XIV属爱文氏菌属(Ewingella)第XV属哈夫尼菌属(Hafnia)第XVI属克雷伯氏菌属(Klebsiella)第XVII属克吕沃尔氏菌属(Kluyvera)第XVIII属勒克氏菌属(Leclercia)第XIX属勒米诺氏菌属(Leminorella)第XX属米勒氏菌属(Moellerella)第XXI属摩根氏菌属(Morganella)第XXII属肥杆菌属(Obesumbacterium)第XXIII属泛菌属(Pantoea)第XXIV属坚固杆菌属(Pectobacterium)第XXV属光杆状菌属(Photorhabdus)第XXVI属邻单胞菌属(Plesiomonas)第XXVII属布拉格菌属(Pragia)第XXVIII属变形菌属(Proteus)第XXIX属普罗威登斯菌属(Providencia)

17第XXX属拉恩氏菌属(Rdhnella)第XXXI属糖杆菌属(Saccharobacter)第XXXII属沙门氏菌属(Salmonella)第XXXIII属沙雷氏菌属(Serratia)第XXXIV属志贺氏菌属(Shigella)第XXXV属伴蝇菌属(Sodalis)第XXXVI属塔特姆氏菌属(Tatumella)第XXXVII属特拉布斯氏菌属(Trabulsiella)第XXXVIII属威格尔斯沃思氏菌属(Wigglesworthia)第XXXIX属致病杆菌属(Xenorhabdus)第XL属耶尔森氏菌属(Yersinia)第XLI属预研菌属(Yokenella)第XIV目巴斯德氏菌目(Pasteurellales)第I科巴斯德氏菌科(Pasteurellaceae)第I属巴斯德氏菌属(Pasteurella)第II属放线杆菌属(Actinobacillus)第III属嗜血菌属(Haemophilus)第IV属隆派恩菌属(Lonepinella)第V属曼海姆氏菌属(Mannheimia)第VI属海豚杆菌属(Phocoenobacter)第IV纲“德耳塔变形杆菌纲”(“Deltaproteobacteria”)第I目“脱硫菌目”(“Desulfurellales”)第I科“脱硫菌科”（“Desulfurellaceae”）第I属脱硫菌属(Desulfurella)第II属希普氏菌属(Hippea)第II目“脱硫弧菌目”(“Desulfovibrionales”)第I科“脱硫弧菌科”(“Desulfovibrionaceae”)第I属脱硫弧菌属(Desulfovibrio)第II属嗜胆菌属(Bilophila)第III属劳森氏菌属(Lawsonia)第II科“脱硫微杆菌科”(“Desulfomicrobiaceae”)第I属脱硫微杆菌属(Desulfomicrobium)第III科“脱硫盐菌科”(“Desulfohalobiaceae”)第I属脱硫盐菌属(Desulfohalobium)第II属脱硫单胞菌属(desulfomonas)第III属脱硫酸弯曲杆菌属(Desulfonatronovibrio)第IV科脱硫弯曲杆菌科(“Desulfonatronumaceae”)第I属脱硫弯曲杆菌属(Desulfonatronum)第III目脱硫杆菌目(“Desulfobacterales”)第I科脱硫杆菌科(“Desulfobacteraceae”)第I属脱硫杆菌属(Desulfobacter)第II属脱硫杆状菌属(Desulfobacterium)

18第III属脱硫橄榄样菌属(Desulfobacula)第IV属脱硫胞状菌属（Desulfocella）第V属脱硫球菌属（Desulfococcus）第VI属脱硫豆状菌属（Desulfofaba）第VII属脱硫冷栖菌属（Desulfofrigus）第VIII属脱硫线菌属（Desulfonema）第IX属脱硫八叠球菌属（Desulfosarcina）第X属脱硫螺菌属（Desulfospira）第XI属脱硫小杆菌属(Desulfotalea)第XII属(“Desulfotignum”)第II科脱硫叶菌科(”Desulfobulbaceae”)第I属脱硫叶菌属(Desulfobulbus)第II属脱硫盒菌属(Desulfocapsa)第III属脱硫棒菌属(Desulfofustis)第IV属脱硫管状菌属(Desulforhopalus)第III科硝化刺菌科(Nitrospinaceae)第I属硝化刺菌属(Nitrospina)第II属脱硫橄榄状菌属(Desulfobacca)第III属脱硫念珠菌属(Desulfomonile)第IV目脱硫单胞菌目(“Desulfuromonadales”)第I科脱硫单胞菌科(“Desulfuromonadaceae”)第I属脱硫单胞菌属(Desulfuromonas)第II属硫还原弯形菌属（Desulfuromusa)第II科“土杆菌科”(“Geobacteraceae”)第I属土杆菌属(Geobacter)第III科“粘土杆菌科”(“Pelobacteraceae”)第I属粘土杆菌属(Pelobacter)第II属丙二酸单胞菌属(Malonomonas)第III属(Trichlorobacter)第V目“互营杆菌目”(“Syntrophobacterales”)第I科“互营杆菌科”（“Syntrophobacteraceae”）第I属互营杆菌属(Syntrophobacter)第II属脱硫葡萄状菌属(Desulfacinum)第III属杆状脱硫菌属(Desulforhabdus)第IV属(Desulfovirga)第V属热硫还原杆菌属(Thermodesulforhabdus)第II科“互养菌科”(“Syntrophaceae”)第I属互养菌属(Syntrophus)第II属史密斯氏菌属(Smithella)第VI目“蛭弧菌目”(“Bdellovibrionales”)第I科“蛭弧菌科”(“Bdellovibrionaceae”)第I属蛭弧菌属(Bdellovibrio)第II属(Bacteriovorax)第III属云母弧菌属(Micavibrio)

19第IV属吸血弧菌属(Vampirovibrio)第VII目枯球菌目(Myxococcales)第I科帖球菌科(Myxococcaceae)第I属粘球菌属(Myxococcus)第II属囊球菌属(Angiococcus)第II科原囊菌科(Archangiaceae)第I属原囊菌属(Archangium)第III科孢囊杆菌科(Cystobacteraceae)第I属孢囊杆菌属(Cystobacter)第II属蜂窝囊菌属(Melittangium)第III属标桩菌属(Stigmatella)第IV科多囊菌科(Polyangiaceae)第I属多囊菌属(Polyangium)第II属软骨霉状菌属(Chondromyces)第III属侏儒囊菌属(Nannocystis)第V纲“艾普西隆变形杆菌纲”(“Epsilonproteobacteria”)第I目“弯曲杆菌目”(“Campylobacterales”)第I科弯曲杆菌科(Campylobacteraceae)第I属弯曲杆菌属(Campylobacter)第II属弓形菌属(Arcobacter)第III属硫化螺旋菌属(Sulfurospirillum)第IV属卵硫菌属(Thiovulum)第II科“螺杆菌科”(“Helicobacteraceae”)第I属螺杆菌属(Helicobacter)第II属沃林氏菌属(Wolinella)第BXIII门厚壁菌门(Firmicutes)第I纲梭菌纲(“Clostridia”)第I目梭菌目(Clostridiales)第I科梭菌科(Clostridaceae)第I属梭菌属(Clostridium)第II属醋弧菌属(Acetivibrio)第III属氨基酸杆菌属(Acidaminobacter)第IV属厌氧杆菌属(Anaerobacter)第V属喜热菌属(Caloramator)第VI属(Coprobacillus)第VII属(Natronincola)第VIII属产醋杆菌属(Oxobacter)第IX属八叠球菌属(Sarcina)第X属孢杆菌属(Sporobacter)第XI属热分枝菌属(Thermobrachium)第XII属(Thermohalobacter)

20第XIII属丁达尔氏菌属(Tindallia)第II科“毛螺菌科”(“Lachnospiraceae”)第I属毛螺菌属(Lachnospira)第II属醋香肠菌属(Acetitomaculum)第III属厌氧细杆菌属(Anaerofilum)第IV属丁酸弧菌属(Butyrivibrio)第V属(Catenibacterium)第VI属卡托氏菌属(Catonella)第VII属粪球菌属(Coprococcus)第VIII属约翰森氏菌属(Johnsonella)第IX属假丁酸弧菌属(Pseudobutyrivibrio)第X属罗斯伯里氏菌属(Roseburia)第XI属瘤胃球菌属(Ruminococcus)第XII属生孢杆菌属(Sporobacterium)第III科“消化链球菌科”(“Peptostreptococcaceae”)第I属消化链球菌属(Peptostreptococcus)第II属产线菌属(Filifactor)第III属(Finegoldia)第IV属小纺锤状菌属(Fusibacter)第V属创伤球菌属(Helcococcus)第VI属(Micromonas)第VII属蒂西耶氏菌属(Tissierella)第IV科“真杆菌科”(“Eubacteriaceae”)第I属真杆菌属(Eubacterium)第II属醋酸杆菌属(Acetobacterium)第III属(Anaerovorax)第IV属(Mogibacterium)第V属假支杆菌属(Pseudoramibacter)第V科消化球菌科(Peptococcaceae)第I属消化球菌属(Peptococcus)第II属厌氧弓形菌属(Anaeroarcus)第III属厌氧弯曲菌属(Anaerosinus)第IV属厌氧弧菌属(Anaerovibrio)第V属一氧化碳嗜热菌属(Carboxydothermus)第VI属蜈蚣状菌属(Centipeda)第VII属脱卤素杆菌属(Dehalobacter)第VIII属树源生孢杆菌属(Dendrosporobacter)第IX属脱亚硫酸菌属(Desulfitobacterium)第X属脱磺酸盐生孢杆菌属(Desulfonispora)第XI属脱硫芽孢弯曲菌属(Desulfosporosinus)第XII属脱硫肠状菌属(Desulfotomaculum)第XIII属光岗菌属(Mitsuokella)第XIV属丙酸螺菌属(Propionispira)第XV属琥珀酸螺菌属(Succinispira)

21第XVI属共养香肠样杆菌属(Syntrophobotulus)第XVII属热土杆菌属(Thermoterrabacterium)第VI科“阳光杆菌科”(“Heliobacteriaceae”)第I属阳光杆菌属(Heliobacterium)第II属阳光小杆菌属(Heliobacillus)第III属嗜阳菌属(Heliophilum)第IV属(Heliorestis)第VII科“氨基酸球菌科”(“Acidaminococcaceae”)第I属氨基酸球菌属(Acidaminococcus)第II属醋丝菌属(Acetonema)第III属厌氧弯形菌属(Anaeromusa)第IV属戴阿利斯特杆菌属(Dialister)第V属巨球形菌属(Megasphaera)第VI属(Papillibacter)第VII属硫状菌属(Pectinatus)第VIII属考拉杆菌属(Phascolarctobacterium)第IX属奎因氏菌属(Quinella)第X属施瓦茨氏菌属(Schwartzia)第XI属月形单胞菌属(Selenomonas)第XII属香蕉孢菌属(Sporomusa)第XIII属解琥珀酸菌属(Succiniclasticum)第XIV属韦荣氏球菌属(Veillonella)第XV属嗜发酵菌属(Zymophilus)第VIII科共养单胞菌科(Syntrophomonadaceae)第I属共养单胞菌属(Syntrophomonas)第II属产醋菌属(Acetogenium)第III属氨基杆菌属(Aminobacterium)第IV属氨基单胞菌属(Aminomonas)第V属厌氧小杆菌属(Anaerobaculum)第VI属厌氧分枝菌属(Anaerobranca)第VII属热解纤维素菌属(Caldicellulosiruptor)第VIII属脱硫代硫酸盐弧菌属(Dethiosulfovibrio)第IX属(Pelospora)第X属共养生孢菌属(Syntrophospora)第XI属(Syntrophothermus)第XII属嗜热好氧杆菌属(Thermaerobacter)第XIII属热厌氧弧菌属(Thermanaerovibrio)第XIV属热生水菌属(Thermohydrogenium)第XV属热共生菌属(Thermosyntropha)第II目“好热厌氧杆菌目”(“Thermoanaerobacteriales”)第I科“好热厌氧杆菌科”(“Thermoanaerobacteriaceae”)第I属好热厌氧杆菌属(Thermoanaerobacterium)第II属制氨菌属(Ammonifex)第III属(Carboxydobrachium)

22第IV属粪热杆菌属(Coprothermobacter)第V属穆尔氏菌属(Moorella)第VI属香肠状芽孢菌属(Sporotomaculum)第VII属(Thermacetogenium)第VIII属热厌氧杆菌属(Thermoanaerobacter)第IX属热厌氧菌属(Thermoanaerobium)第III目盐厌氧菌目(Haloanaerobiales)第I科盐厌氧菌科(Haloanaerobiaceae)第I属盐厌氧菌属(Haloanaerobium)第II属嗜盐菌属(Halocella)第III属盐热发菌属(Halothermothrix)第IV属喜碱菌属(Natroniella)第II科拟盐杆菌种(Halobacteroidaceae)第I属拟盐杆菌属(Halobacteroides)第II属醋盐杆菌属(Acetohalobium)第III属盐厌氧杆菌属(Haloanaerobacter)第IV属奥芮氏菌属(Orenia)第V属生孢盐杆菌属(Sporohalobacter)第II纲柔膜菌纲(Mollicutes)第I目支原体目(Mycoplasmatales)第I科支原体科(Mycoplasmataceae)第I属支原体属(Mycoplasma)第II属血虫体属(Eperythrozoon)第III属血巴通氏体属(Haemobartonella)第IV属尿支原体属(Ureaplasma)第II目虫原体目(Entomoplasmatales)第I科虫原体科(Entomoplasmataceae)第I属虫原体属(Entomoplasma)第II属中间原体属(Mesoplasma)第II科螺原体科(Spiroplasmataceae)第I属螺原体属（Spiroplasma）第III目无胆甾原体目(Acholeplasmatales)第I科无胆甾原体科(Acholeplasmataceae)第I属无胆甾原体属(Acholeplasma)第IV目厌氧支原体目(Anaeroplasmatales)第I科厌氧支原体科(Anaeroplasmataceae)第I属厌氧支原体属(Anaeroplasma)第II属无甾醇支原体属(Asteroleplasma)第V目未定第I科“丹毒丝菌种”（“Erysipelotrichaceae”）第I属丹毒丝菌属(Erysipelothrix)第II属(Bulleidia)第III属霍尔德曼氏菌属(Holdemania)

23第IV属(Solobacterium)第III纲芽孢杆菌纲(“Bacilli”)第I目芽孢杆菌目(Bacillales)第I科芽孢杆菌科(Bacillaceae)第I属芽孢杆菌属(Bacillus)第II属兼性芽孢杆菌届(Amphibacillus)第III属(Anoxybacillus)第IV属微小杆菌属(Exiguobacterium)第V属纤细芽孢杆菌属(Gracilibacillus)第VI属喜盐芽孢杆菌属(Halobacillus)第VII属糖球菌属(Saccharococcus)第VIII属盐芽孢杆菌属(Salibacillus)第IX属支芽孢杆菌属(Virgibacillus)第II科动性球菌科(Planococcaceae)第I属动性球菌属(Planococcus)第II属线状杆菌属(Filibacter)第III属库特氏菌属(Kurthia)第IV属芽孢八叠球菌属(Sporosarcina)第III科显核菌科(Caryophanaceae)第I属显核菌属(Caryophanon)第IV科“李斯特氏菌科”(“Listeriaceae”)第I属李斯特氏菌属(Listeria)第II属索丝菌属(Brochothrix)第V科“葡萄球菌科”（“Staphylococcaceae”）第I属葡萄球菌属(Staphylococcus)第II属孪生球菌属(Gemella)第III属巨大球菌属(Macrococcus)第IV属盐水球菌属(Salinicoccus)第VI科“芽孢乳杆菌科”(“Sporolactobacillaceae”)第I属芽孢乳杆菌属(Sporolactobacillus)第II属海球菌属(Marinococcus)第VII科“类芽孢杆菌科”(“Paenibacillaceae”)第I属类芽孢杆菌属(Paenibacillus)第II属喜氨菌属(Ammoniphilus)第III属解硫胺素杆菌属(Aneurinibacillus)第IV属短小芽孢杆菌属(Brevibacillus)第V属嗜草酸菌属(Oxalophagus)第VI属热杆菌属(Thermicanus)第VII属热杆菌属(Thermobacillus)第VIII科脂环酸芽孢杆菌科(“Alicyclobacillaceae”)第I属指环酸芽孢杆菌属(Alicyclobacillus)第II属巴靳德氏芽菌属(Pasteuria)第III属硫化芽孢杆菌属(Sulfobacillus)

24第IX科“高温放线菌科”(“Thermoactinomycetaceae”)第I属高温放线菌属(Thermoactinomyces)第II目“乳杆菌目”(“Lactobacillales”)第I科乳杆菌科(Lactobacillaceae)第I属乳杆菌属(Lactobacillus)第II属(Paralactobacillus)第III属片球菌属(Pediococcus)第II科”气球菌科”（“Aerococcaceae”）第I属气球菌属(Aerococcus)第II属乏养菌属(Abiotrophia)第III属狡诈球菌属(Dolosicoccus)第IV属另位球菌属(Eremococcus)第V属费克蓝姆氏菌属(Facklamia)第VI属球链菌属(Globicatella)第VII属不活动粒菌属(Ignavigranum)第III科“肉杆菌科”(“Carnobacteriaceae”)第I属肉杆菌属(Carnobacterium)第II属震球菌属(Agitococcus)第III属差异球菌属(Alloiococcus)第IV属德库菌属(Desemzia)第V属狡诈球菌属(Dolosigranulum)第VI属产乳酸球菌属(Lactosphaera)第VII属毛球菌属(Trichococcus)第IV科“肠球菌科”(“Enterococcaceae”)第I属肠球菌属(Enterococcus)第II属(Atopobacter)第III属蜜蜂球菌属(Melissococcus)第IV属四联球菌属(Tetragenococcus)第V属漫游球菌属(Vagococcus)第V科“明串珠菌科”(“Leuconostocaceae”)第I属明串珠菌属(Leuconostoc)第II属酒球菌属(Oenococcus)第III属魏斯氏菌属(Weissella)第VI科链球菌科(Streptococcaceae)第I属链球菌属(Streptococcus)第II属乳球菌属(Lactococcus)第VII科未定第I属厌氧醋菌属(Acetoanaerobium)第II属颤螺菌属(Oscillospira)第III属共养球菌属(Syntrophococcus)第BXIV门放线菌门(Actinobacteriaphy.nov.)第I纲放线菌纲(Actinobacteria)

25第I亚纲醋微菌亚纲(Acidimicrobidae)第I目醋微菌目(Acidimicrobiales)第I亚目“醋微菌亚目”(“Acidimicrobineae”)第I科醋微菌科(Acidimicrobiaceae)第I属醋微菌属(Acidimicrobium)第II亚纲红细菌亚纲(Rubrobacteridae)第I目红细菌目(Rubrobacterales)第I亚目“红细菌亚目”(“Rubrobacterineae”)第I科红细菌科(Rubrobacteraceae)第I属红色杆菌属(Rubrobacter)第III亚纲红蝽菌亚纲(Coriobacteridae)第I目红蝽菌目(Coriobacteriales)第I亚目“红蝽菌亚目”(“Coriobacterineae”)第I科红蝽菌科(Coriobacteriaceae)第I属红蝻菌属(Coriobacterium)第II属陌生物菌属(Atopobium)第III属柯林斯氏菌属(Collinsella)第IV属短小杆菌属(Cryptobacterium)第V属(Denitrobacterium)第VI属依格斯氏菌属(Eggerthella)第VII属史雷克氏菌属(Slackia)第IV亚纲球杆菌亚纲(Sphaerobacteridae)第I目球杆菌目(Sphaerobacterales)第I亚目“球杆菌亚目”(“Sphaerobacterineae”)第I科球杆菌科(Sphaerobacteraceae)第I属球杆菌属(Sphaerobacter)第V亚纲放线菌亚纲(Actinobacteridae)第I目放线菌目(Actinomycetales)第I亚目放线菌亚目(Actinomycineae)第I科放线菌科(Actinomycetaceae)第I属放线菌属(Actinomyces)第II属放线杆状菌属(Actinobaculum)第III属隐秘杆菌属(Arcanobacterium)第IV属动弯杆菌属(Mobiluncus)第II亚目微球菌亚目(Micrococcineae)第I科微球菌科(Micrococcaceae)第I属微球菌属(Micrococcus)第II属节杆菌属(Arthrobacter)第III属考克氏菌属(Kocuria)第IV属涅斯捷连科氏菌属(Nesterenkonia)第V属肾杆菌属(Renibacterium)第VI属罗斯氏菌属(Rothia)第VII属口腔球菌属(Stomatococcus)第II科博戈里亚湖菌科(Bogoriellaceae)

26第I属博戈里亚湖菌属（Bogoriella(moved)）第III科稀有杆菌科(Rarobacteraceae)第I属稀有杆菌属（Rarobacter(moved)）第IV科血杆菌科(Sanguibacteraceae)第I属血杆菌属(Sanguibacter)第V科短杆菌科(Brevibacteriaceae)第I属短杆菌属(Brevibacterium)第VI科纤维单胞菌科(Cellulomonadaceae)第I属纤维单胞菌属(Cellulomonas)第II属厄氏菌属(Oerskovia)第VII科皮杆菌科(Dermabacteraceae)第I属皮杆菌属(Dermabacter)第II属短状杆菌属(Brachybacterium)第VIII科嗜皮菌科(Dermatophilaceae)第I属嗜皮菌属(Dermatophilus)第IX科皮生球菌科(Dermacoccaceae)第I属皮生球菌属(Dermacoccusmoved)第II属肥沃菌属(Demetriamoved)第III属皮肤球菌属(Kytococcusmoved)第X科间孢囊菌科(Intrasporangiaceae)第I属间孢囊菌属(Intrasporangium)第II属两面神菌属(Janibacter)第III属鸟氨酸球菌属(Ornithinicoccus)第IV属(Ornithinimicrobium)第V属(Nostocoidia)第VI属地杆菌属(Terrabacter)第VII属(Terracoccus)第VIII属(Tetrasphaera)第XI科琼斯氏菌科(Jonesiaceae)第I属琼斯氏菌属(Jonesia)第XII科微杆菌科(Microbacteriaceae)第I属微杆菌属(Microbacterium)第II属土壤球菌属(Agrococcus)第III属壤霉菌属(Agromyces)第IV属金杆菌属(Aureobacterium)第V属棍状杆菌属(Clavibacter)第VI属冷杆菌属(Cryobacterium)第VII属短小杆菌属(Curtobacterium)第VIII属冰冻小杆菌属(Frigoribacterium)第IX属雷弗松氏菌属(Leifsonia)第X属(Leucobactermoved)第XI属拉氏杆菌属(Rathayibacter)第XII属(Subtercola)第XIII科“布坦堡菌科”(“Beutenbergiaceae”)

27第I属布坦堡菌属(Beutenbergia)第XIV科原小单孢菌科(Promicromonosporaceae)第I属原小单孢菌属(Promicromonospora)第VII亚目棒杆菌亚目(Corynebacterineae)第I科棒杆菌科(Corynebacteriaceae)第I属棒杆菌属(Corynebacterium)第II科迪茨氏菌种(Dietziaceae)第I属迪茨氏菌属(Dietzia)第III科戈登氏菌科(Gordoniaceae)第I属戈登氏菌属(Gordonia)第II属斯科曼氏菌属(Skermania)第IV科分支杆菌科（Mycobacteriaceae）第I属分支杆菌属(Mycobacterium)第V科诺卡氏菌科(Nocardiaceae)第I属诺片氏菌属(Nocardia)第II属红球菌属(Rhodococcus)第VI科塚村氏菌科(Tsukamurellaceae)第I属塚村氏菌属(Tsukamurella)第VII科威廉土氏菌科(Williamsiaceae)第I属威廉土氏菌属(Williamsia)第VIII亚目小单孢菌亚目(Micromonosporineae)第I科小单孢菌科(Micromonosporaceae)第I属小单孢菌属(Micromonospora)第II属游动放线菌属(Actinoplanes)第III属链孢菌属(Catellatospora)第IV属短链游动菌属(Catenuloplanes)第V属科氏游动菌属(Couchioplanes)第VI属指孢囊菌属(Dactylosporangium)第VII属发仙菌属(Pilimelia)第VIII属游动螺菌属(Spirilliplanes)第IX属疣孢菌属(Verrucosispora)第IX亚目丙酸杆菌亚目(Propionibacterineae)第I科丙酸杆菌科(Propionibacteriaceae)第I属丙酸杆菌属(Propionibacterium)第II属藤黄球菌属(Luteococcus)第III属小月菌属(Microlunatus)第IV属产丙酸菌属(Propioniferax)第V属四叠球菌属(Tessaracoccus)第II科类诺卡氏菌科(Nocardioidaceae)第I属类诺卡氏菌属(Nocardioides)第II属气微菌属(Aeromicrobium)第III属弗莱德门菌属(Friedmanniella)第IV属(Hongia)

28第V属扑科研菌属(Kribbella)第VI属微白霜菌属(Micropruina)第VII属(Marmoricola)第X亚目假诺卡氏菌亚目(Pseudonocardineae)第I科假诺卡氏菌科(Pseudonocardiaceae)第I属假诺卡氏菌属(Pseudonocardia)第II属(Actinoalloteichus)第III属放线多孢菌属(Actinopolyspora)第IV属拟无枝酸菌属(Amycolatopsis)第V属拟孢囊菌属(Kibdelosporangium)第VI属库茨涅尔氏菌属(Kutzneria)第VII属普劳塞氏菌属(Prauserella)第VIII属糖单孢菌属(Saccharomonospora)第IX属糖多孢菌属(Saccharopolyspora)第X属异壁链霉菌属(Streptoalloteichus)第XI属嗜热双孢菌属(Thermobispora)第XII属热密卷菌属(Thermocrispum)第II科束丝放线菌科(Actinosynnemataceae)第I属束丝放线菌属(Actinosynnema)第II属放线动孢苗属(Actinokineospora)第III属伦茨氏菌属(Lentzea)第IV属糖丝菌属(Saccharothrix)第XI亚目链霉菌亚目(Streptomycineae)第I科链霉菌科(Streptomycetaceae)第I属链霉菌属(Streptomyces)第II属北里孢菌属(Kitasatospora)第III属链轮丝菌属(Streptoverticillium)第XII亚目链孢囊菌亚目(Streptosporangineae)第I科链孢囊菌科(Streptosporangiaceae)第I属链孢囊菌属(Streptosporangium)第II属(Acrocarpospora)第III属草状孢菌属(Herbidospora)第IV属小双孢菌属(Microbispora)第V属小四孢菌属(Microtetraspora)第VI属野野村氏菌属(Nonomuraea)第VII属游动双孢菌属(Planobispora)第VIII属游动单孢菌属(Planomonospora)第IX属游动多孢菌属(Planopolyspora)第X属游动四孢菌属(Planotetraspora)第II科拟诺卡氏菌科(Nocardiopsaceae)第I属拟诺卡氏菌属(Nocardiopsis)第II属喜热裂孢菌属(Thermobifida)第III科高温单孢菌科(Thermomonosporaceae)第I属高温单孢菌属(Thermomonospora)

29第II属马杜拉放线菌属(Actinomadura)第III属螺孢菌属(Spirillospora)第XIII亚目弗兰克氏菌亚目(Frankineae)第I科弗兰克氏菌科(Frankiaceae)第I属弗兰克氏菌属(Frankia)第II科地嗜皮菌科(Geodermatophilaceae)第I属地嗜皮菌属(Geodermatophilus)第II属芽球菌属(Blastococcus)第III属粗食杆菌属(Modestobacter)第III科微球样菌科(Microsphaeraceae)第I属微球样菌属(Microsphaera)第IV科鱼孢菌科(Sporichthyaceae)第I属鱼孢菌属(Sporichthya)第V科热酸菌科(Acidothermaceae)第I属热酸菌属(Acidothermus)第VI科“动孢囊菌科”(“Kineosporiaceae”)第I属动孢囊菌属(Kineosporia)第II属隐孢菌属(Cryptosporangium)第III属动球菌属(Kineococcus)第XIV亚目糖霉菌亚目(Glycomycineae)第I科糖霉菌科(Glycomycetaceae)第I属糖霉菌属(Glycomyces)第II目双歧杆菌目(Bifidobacteriales)第I科双歧杆菌科(Bifidobacteriaceae)第I属双歧杆菌属(Bifidobacterium)第II属镰刀弧菌属(Falcivibrio)第III属加德纳氏菌属(Gardnerella)第II科未分类第I属双孢放线菌属(Actinobispora)第II属珊瑚状放线菌属(Actinocorallia)第III属卓孢菌属(Excellospora)第IV属佩尔泽氏菌属(Pelczaria)第V属苏黎世菌属(Turicella)第BXV门浮霉状菌门(Planctomycetesphy.nov.)第I纲浮霉状菌纲(“Planctomycetacia”)第I目浮霉状菌目(Planctomycetales)第I科浮霉状菌科(Planctomycetaceae)第I属浮霉状菌属(Planctomyces)第II属出芽菌属(Gemmata)第III属等球菌属(Isosphaera)第IV属小小梨形菌属(Pirellula)

30第BXVI门衣原体门(Chlamydiaephy.nov.)第I纲衣原体纲(“Chlamydiae”)第I目衣原体目(Chlamydiales)第I科衣原体科(Chlamydiaceae)第I属衣原体属(Chlamydia)第II属嗜衣原体属(Chlamydophila)第II科副衣原体科(Parachlamydiaceae)第I属副衣原体属(Parachlamydia)第III科西门坎氏菌科(Simkaniaceae)第I属西门坎氏菌属(Simkania)第IV科石德菌科(Waddliaceae)第I属石德菌属(Waddlia)第BXVII门螺旋体门(Spirochaetesphy.nov.)第I纲“螺旋体纲”(“Spirochaetes”)第I目螺旋体目(Spirochaetales)第I科螺旋体科(Spirochaetaceae)第I属螺旋体属(Spirochaeta)第II属疏螺旋体属(Borrelia)第III属短螺旋体属(Brevinema)第IV属克里夫兰氏菌属(Clevelandina)第V属脊螺旋体属(Cristispira)第VI属双膜菌属(Diplocalyx)第VII属霍兰德氏菌属(Hollandina)第VIII属皮约氏菌属(Pillotina)第IX属密螺旋体属(Treponema)第II科“小蛇菌科”(“Serpulinaceae”)第I属小蛇菌属(Serpulina)第II属短螺旋菌属(Brachyspira)第III科钩端螺旋体科(Leptospiraceae)第I属纤线菌属(Leptonema)第II属钩端螺旋体属(Leptospira)第BXVIII门丝状杆菌门(Fibrobacteresphy.nov.)第I纲“丝状杆菌纲”(“Fibrobacteres”)第I目“丝状杆菌目”（“Fibrobacterales”）第I科“丝状杆菌科”（“Fibrobacteraceae”)第I属丝状杆菌属(Fibrobacter)

31第BXIX门酸杆菌门(Acidobacteriaphy.nov.)第I纲“酸杆菌纲”(“Acidobacteria”)第I目“酸杆菌目”(“Acidobacteriales”)第I科“酸杆菌科”(“Acidobacteriaceae”)第I属酸杆菌属(Acidobacterium)第II属土发菌属(Geothrix)第III属全噬菌属(Holophaga)第BXX门拟杆菌门(Bacteroidetesphy.nov.)第I纲“拟杆菌纲”（“Bacteroidetes”）第I目“拟杆菌目”(“Bacteroidales”)第I科拟杆菌科(Bacteroidaceae)第I属拟杆菌属(Bacteroides)第II属线形醋酸菌属(Acetofilamentum)第III属醋微菌属(Acetomicrobium)第IV属醋热菌属(Acetothermus)第V属棍状厌氧菌属(Anaerorhabdus)第VI属巨单胞菌属(Megamonas)第II科理研菌科(“Rikenellaceae”)第I属理研菌属(Rikenella)第II属海洋滑行菌属(Marinilabilia)第III科“卟啉单胞菌科”(“Porphyromonadaceae”)第I属卟啉单胞菌属(Porphyromonas)第II属(Dysgonomonas)第IV科“普雷沃氏菌科”(“Prevotellaceae”)第I属普雷沃氏菌属(Prevotella)第II纲“黄杆菌纲”(“Flavobacteria”)第I目“黄杆菌目”(“Flavobacteriales”)第I科黄杆菌科（Flavobacteriaceae）第I属黄杆菌属(Flavobacterium)第II属伯杰氏菌属(Bergeyella)第III属二氧化碳嗜纤维菌属(Capnocytophaga)第IV属食纤维菌属(Cellulophaga)第V属金黄杆菌属(Chryseobacterium)第VI属居间菌属(Coenonia)第VII属稳杆菌属(Empedobacter)第VIII属冰冷杆菌属(Gelidibacter)第IX属鸟杆菌属(Ornithobacterium)第X属极杆菌属(Polaribacter)第XI属冷屈挠菌属(Psychroflexus)第XII属冷蛇菌属(Psychroserpens)

32第XIII属立默氏菌属(Riemerella)第XIV属(Saligentibacter)第XV属威克斯氏菌属(Weeksella)第II科“类香味菌科”(“Myroidaceae”)第I属类香味菌属(Myroides)第II属冷单胞菌属(Psychromonas)第III科“蟑螂杆状体科”(“Blattabacteriaceae”)第I属蟑螂杆状体属(Blattabacterium)第III纲“鞘氨醇杆菌纲”(“Sphingobacteria”)第I目“鞘氨醇杆菌目”(“Sphingobacteriales”)第I科鞘氨醇杆菌科（Sphingobacteriaceae）第I属鞘氨醇杆菌属(Sphingobacterium)第II属上地杆菌属(Pedobacter)第II科“腐败螺旋菌科”(“Saprospiraceae”)第I属腐败螺旋菌属(Saprospira)第II属束缚杆菌属(Haliscomenobacter)第III属赖文氏菌属(Lewinella)第III科“屈挠杆菌科”(“Flexibacteraceae”)第I属屈挠杆菌属(Flexibacter)第II属环杆菌属(Cyclobacterium)第III属噬纤维菌属(Cytophaga)第IV属(Dyadobacter)第V属弯杆菌属(Flectobacillus)第VI属薄层菌属(Hymenobacter)第VII属新月菌属(Meniscus)第VIII属微颤菌属(Microscilla)第IX属古字状菌属(Runella)第X属螺状菌属(Spirosoma)第XI属生孢噬纤维菌属(Sporocytophaga)第IV科“火色杆菌科”(“Flammeovirgaceae”)第I属火色杆菌属(Flammeovirga)第II属柔发菌属(Flexithrix)第III属桃色杆菌属(Persicobacter)第IV属栖热线菌属(Thermonema)第V科泉发菌科(Crenotrichaceae)第I属泉发菌属(Crenothrix)第II属噬几丁质菌属(Chitinophaga)第III属红嗜热盐菌属(Rhodothermus)第IV属曲发菌属(Toxothrix)第BXXI门梭杆菌门(Fusobacteriaphy.nov.)第I纲“梭杆菌纲”(“Fusobacteria”)第I目“梭杆菌目”(“Fusobacteriales”)

33第I科“梭杆菌科”(“Fusobacteriaceae”)第I属梭杆菌属(Fusobacterium)第II属泥杆菌属(Ilyobacter)第III属纤毛菌属(Leptrotrichia)第IV属生丙酸菌属(Propionigenium)第V属塞巴尔德氏菌属(Sebaldella)第VI属链杆菌属(Streptobacillus)第II科未定第I属鲸杆菌属(Cetobacterium)第BXXII门疣微菌门(Verrucomicrobiaphy.nov.)第I纲疣微菌纲(Verrucomicrobiae)第I目疣微菌目(Verrucomicrobiales)第I科疣徽菌科(Verrucomicrobiaceae)第I属疣微菌属(Verrucomicrobium)第II属突柄杆菌属(Prosthecobacter)第II科(Xiphinematobacteriaceae)第I属(Xiphinematobacter)第BXXIII门网球菌门(Dictyoglomusphy.nov.)第I纲“网球菌纲”(“Dictyoglomi”)第I目“网球菌目”(“Dictyoglomales”)第I科“网球菌科”(“Dictyoglomaceae”)第I属网球菌属(Dictyoglomus)贴心服务，以下空白部分可添加备注哦：（祝您成功！）

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