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时间:2018-09-20
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1、Chapter2EnzymesReducedDsbAfromE.coliLysozyme§2.1IntroductionDefinitionHistoryBüchner,1897:AbreakthroughinEnzymology.Catalystsatworkinalivingorganismcouldalsofunctioncompletelyindependentlyofanylifeprocess.EffortstoisolateandpurifyindividualenzymeswereBüchner’sdiscoveries.Sumner,1926:Firstisolati
2、onofapureenzyme.Enzymesareusuallyproteinsofhighmolecularweight(15,0003、owertheactivationenergyofthereaction,butDoesn’taffectFree-energychangeEquilibriumconstant8/6/20213EnzymeExample:Thedecompositionofhydrogenperoxide(H2O2):18kcal/molUncatalyzedreactionat20℃ColloidalplatinumChemicallycatalyzedHydrogenperoxidaseEnzymaticallycatalyzed13kcal/mol7kcal/molFromArrheniuse4、quation:Wehave,8/6/20214EnzymeTheinteractionbetweentheenzymeanditssubstrate——weakforce:vanderWaalsforcesHydrogenbondingSpecific:CatalyzeonekindofreactionInvolvingcertainsubstratesNeedforcofactorsorcoenzyme:Cofactors:metalions:Mg,Zn,Mn,FeCoenzyme:acomplexorganicmolecule:NAD,FAD,CoA,somevitamins8/5、6/20215EnzymeEnzymesarenamedbyaddingthesuffix–asetothe:EndofthesubstrateSuchasureaseThereactioncatalyzedSuchasalcoholdehydrogenaseNomenclatureEnzymesusingfamiliarnames:PepsininthedigestivetractTrypsininthedigestivetractRenninusedincheesemaking“Oldyellow”,whichcausedbrowningofslicedapples8/6/20216、6EnzymeEC(EnzymeCommission)SIXclassesnumberedinFOURdigitsClassificationThefirstdigitalTheseconddigitalThethirddigitalThefourthdigitalTypeofreactioncatalyzed——mainclasses——actualsubstance8/6/20217EnzymeOxidoreductasesFirstdigit1––theclassoxidoreductases.Seconddigit––thedonorofhydrogenatomorelectr7、oninvolved.AlcoholAldehydeorketoneAlkene–CH=CH-PrimaryamineSecondaryamineNADH,NADPHThirddigit––hydrogenatomorelectronacceptor.NAD+,NADP+Fe3+O2OtherwiseunclassifiedFourthdigit––numberforfurtheridentification.8/6/20218EnzymeTr
3、owertheactivationenergyofthereaction,butDoesn’taffectFree-energychangeEquilibriumconstant8/6/20213EnzymeExample:Thedecompositionofhydrogenperoxide(H2O2):18kcal/molUncatalyzedreactionat20℃ColloidalplatinumChemicallycatalyzedHydrogenperoxidaseEnzymaticallycatalyzed13kcal/mol7kcal/molFromArrheniuse
4、quation:Wehave,8/6/20214EnzymeTheinteractionbetweentheenzymeanditssubstrate——weakforce:vanderWaalsforcesHydrogenbondingSpecific:CatalyzeonekindofreactionInvolvingcertainsubstratesNeedforcofactorsorcoenzyme:Cofactors:metalions:Mg,Zn,Mn,FeCoenzyme:acomplexorganicmolecule:NAD,FAD,CoA,somevitamins8/
5、6/20215EnzymeEnzymesarenamedbyaddingthesuffix–asetothe:EndofthesubstrateSuchasureaseThereactioncatalyzedSuchasalcoholdehydrogenaseNomenclatureEnzymesusingfamiliarnames:PepsininthedigestivetractTrypsininthedigestivetractRenninusedincheesemaking“Oldyellow”,whichcausedbrowningofslicedapples8/6/2021
6、6EnzymeEC(EnzymeCommission)SIXclassesnumberedinFOURdigitsClassificationThefirstdigitalTheseconddigitalThethirddigitalThefourthdigitalTypeofreactioncatalyzed——mainclasses——actualsubstance8/6/20217EnzymeOxidoreductasesFirstdigit1––theclassoxidoreductases.Seconddigit––thedonorofhydrogenatomorelectr
7、oninvolved.AlcoholAldehydeorketoneAlkene–CH=CH-PrimaryamineSecondaryamineNADH,NADPHThirddigit––hydrogenatomorelectronacceptor.NAD+,NADP+Fe3+O2OtherwiseunclassifiedFourthdigit––numberforfurtheridentification.8/6/20218EnzymeTr
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